| Main sequences |
|---|
| ID | Name | Group | Sample Origin | Sample Source | Museum Accession | GenBank Accession |
|---|
| DiMa080b | rattus diardi (diardii clade) | diardii | Kuala Lumpur, Malaysia | SAM | ABTC64907 | EF186409 |
| DiMa126b | rattus diardi (diardii clade) | diardii | Kuala Lumpur, Malaysia | SAM | ABTC64906 | EF186413 |
| ExCI031b | exulans (exulans clade) | exulans | Aitutaki, Cook Islands | E M-S | - | EF186414 |
| ExCI032b | exulans (exulans clade) | exulans | Aitutaki, Cook Islands | E M-S | - | EF186415 |
| ExIn023b | exulans (exulans clade) | exulans | Cibodas Forest, Indonesia | SAM | ABTC48011 | EF186421 |
| ExPN024b | exulans (exulans clade) | exulans | Yuro, Papua New Guinea | SAM | ABTC43078 | EF186427 |
| ExSa029b | exulans (exulans clade) | exulans | Manua, Samoa | E M-S | - | EF186430 |
| ExSa030b | exulans (exulans clade) | exulans | Manua, Samoa | E M-S | - | EF186431 |
| ExTh026b | exulans (exulans clade) | exulans | Thailand | SAM | ABTC 8553 | EF186432 |
| FlHk045b | flavipectus (tanezumi clade) | tanezumi | Hong Kong, China | SAM | ABTC 8489 | EF186440 |
| FuAu056b | fuscipes assimilis (fuscipes clade) | fuscipes | Lismore, Australia | SAM | ABTC51715 | EF186435 |
| FuAu057b | fuscipes coracius (fuscipes clade) | fuscipes | Mt Windsor, Queensland, Australia | SAM | ABTC51727 | EF186436 |
| FuAu059b | fuscipes fuscipes (fuscipes clade) | fuscipes | 26k W Manjimup, Australia | SAM | ABTC 8615 | EF186438 |
| HoSu044b | hoffmanni (hoffmanni clade) | hoffmanni | Tangoa, Sulawesi, Indonesia | SAM | ABTC65754 | EF186441 |
| HoSu061b | hoffmanni (hoffmanni clade) | hoffmanni | Mt Nokilalaki, Sulawesi, Indonesia | SAM | ABTC65809 | EF186442 |
| KaSL063b | kandianus (diardii clade) | diardii | Sri Lanka | SAM | ABTC 8529 | EF186444 |
| LeAu069b | leucopus cooktownensis (leucopus clade) | leucopus | Mt Simons, 19mls S Cooktown Queensland, Australia | SAM | ABTC 8447 | EF186447 |
| LeAu071b | leucopus leucopus (leucopus clade) | leucopus | Rocky River Queensland, Australia | SAM | ABTC 8493 | EF186452 |
| LePN066b | leucopus (verecundus clade) | verecundus | Haia, Central Highland Province, Papua New Guinea | SAM | ABTC42808 | EF186449 |
| MoPN046b | mordax (PNG 1 clade) | PNG 1 | Nokopo, Morobe Province, Papua New Guinea | SAM | ABTC48962 | EF186453 |
| NiPN072b | niobe (PNG 1 clade) | PNG 1 | Bundi, Madang Province, Papua New Guinea | SAM | ABTC49306 | EF186456 |
| NiPN073b | niobe (PNG 2 clade) | PNG 2 | Magidobo, Southern Highland Province, Papua New Guinea | SAM | ABTC45409 | EF186457 |
| NiPN074b | niobe (PNG 2 clade) | PNG 2 | Mt Karimui, Central Highland Province, Papua New Guinea | SAM | ABTC43906 | EF186458 |
| NiPN075b | niobe (PNG 3 clade) | PNG 3 | near Kosipe Mt Albert Edward Central Province, Papua New Guinea | SAM | ABTC42503 | EF186459 |
| NiPN077b | niobe (PNG 3 clade) | PNG 3 | Sol River, West Sepik Province, Papua New Guinea | SAM | ABTC47145 | EF186460 |
| NoDe048b | norvegicus (norvegicus clade) | norvegicus | Copenhagen, Denmark | GenBank | - | AJ428514 |
| Noxx001b | norvegicus (norvegicus clade) | norvegicus | laboratory strain | GenBank | - | NC_001665 |
| PrPN123b | praetor (PNG 1 clade) | PNG 1 | Munbil, West Sepik Province, Papua New Guinea | SAM | ABTC47271 | EF186466 |
| PrPN124b | praetor (PNG 1 clade) | PNG 1 | Munbil, West Sepik Province, Papua New Guinea | SAM | ABTC47273 | EF186467 |
| RaNZ004b | rattus (rattus 1 clade) | rattus 1 | Titirangi, New Zealand | E M-S | - | EF186470 |
| RaPN009b | rattus (rattus 2 clade) | rattus 2 | Moitaka, National Capital District, Papua New Guinea | SAM | ABTC44857 | EF186471 |
| RaPN010b | rattus (rattus 1 clade) | rattus 1 | Sideia Is., Milne Bay Province, Papua New Guinea | SAM | ABTC50177 | EF186472 |
| RaPN079b | rattus (rattus 2 clade) | rattus 2 | Moitaka, National Capital District, Papua New Guinea | SAM | ABTC44858 | EF186473 |
| RuPN055b | ruber (PNG 1 clade) | PNG 1 | Yuro, Central Highland Province, Papua New Guinea | SAM | ABTC43216 | EF186476 |
| SoAu087b | sordidus (sordidus clade) | sordidus | Ingham, Queensland, Australia | SAM | ABTC51664 | EF186478 |
| SoAu088b | sordidus (sordidus clade) | sordidus | Sir Edward Pellew Is. Northern Territory, Australia | SAM | ABTC41164 | EF186479 |
| StIn090b | steini (PNG 1 clade) | PNG 1 | Bogor Botanic Gardens, Java, Indonesia | SAM | ABTC44036 | EF186481 |
| StPN047b | steini (PNG 1 clade) | PNG 1 | Nokopo, MP, Papua New Guinea | SAM | ABTC49035 | EF186483 |
| TaIn018b | tanezumi (tanezumi clade) | tanezumi | Jakarta, Java, Indonesia | SAM | ABTC47993 | EF186491 |
| TaIn019b | tanezumi (tiomanicus clade) | tiomanicus | Jakarta, Java, Indonesia | SAM | ABTC47994 | EF186492 |
| TaIn022b | tanezumi (tanezumi clade) | tanezumi | Yogyakarta, Java, Indonesia | SAM | ABTC47983 | EF186495 |
| TaIn100b | tanezumi (diardii clade) | diardii | Jakarta, Java, Indonesia | SAM | ABTC47997 | EF186498 |
| TaIn103b | tanezumi (diardii clade) | diardii | Jakarta, Java, Indonesia | SAM | ABTC48000 | EF186501 |
| TaIn107b | tanezumi (tanezumi clade) | tanezumi | Yogyakarta, Java, Indonesia | SAM | ABTC47984 | EF186502 |
| TaJp014b | tanezumi (tanezumi clade) | tanezumi | Anami Island, Japan | SAM | ABTC 8487 | EF186508 |
| TaSu105b | tanezumi (diardii clade) | diardii | northern Sulawesi, Indonesia | SAM | ABTC48005 | EF186512 |
| TiIn050b | tiomanicus (tiomanicus clade) | tiomanicus | Cibodas forest, Java, Indonesia | SAM | ABTC48026 | EF186513 |
| TuAu114b | tunneyi (tunneyi clade) | tunneyi | Litchfield, NP, Northern Territory, Australia | SAM | ABTC29636 | EF186515 |
| TuAu118b | tunneyi (tunneyi clade) | tunneyi | Yarraman, Queensland, Australia | SAM | ABTC51688 | EF186518 |
| VePN053b | verecundus (verecundus clade) | verecundus | Bobole, Southern Highland Province, Papua New Guinea | SAM | ABTC45161 | EF186519 |
| VePN119b | verecundus (PNG 3 clade) | PNG 3 | Bundi, Madang Province, Papua New Guinea | SAM | ABTC49292 | EF186520 |
| VePN120b | verecundus (verecundus clade) | verecundus | Noru, Central Highland Province, Papua New Guinea | SAM | ABTC43510 | EF186521 |
