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DNA Surveillance

Species identification with DNA
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Search Cluster (Simple) Cluster (Advanced) Maximum Likelihood Example Data

General details for dataset 'Amazona Identification Chaves COI Barcode'

Loci: Cytochrome Oxidase Subunit I (barcode)
Domain: Amazona identification
Alignment: 40 sequences, 474 sites
Alignment scoring
-ACGT
A1.0-1.0-1.0-1.0
C-1.01.0-1.0-1.0
G-1.0-1.01.0-1.0
T-1.0-1.0-1.01.0
Create/extend = -2.9/-0.7
Substitution model
-ACGT
A-1.01.01.0
C1.0-1.01.0
G1.01.0-1
T1.01.01-
(A,G,C,T) = (0.25, 0.25, 0.25, 0.25)

Sequence details

IDNameGroupGenBank
4045_ctg2 4045_ctg2Unspecified?
fvvmg95169 fvvmg95169Unspecified?
4056 4056Unspecified?
fvv339 fvv339Unspecified?
conmg427 conmg427Unspecified?
fvv066 fvv066Unspecified?
fvv267 fvv267Unspecified?
fvv276 fvv276Unspecified?
fvv573 fvv573Unspecified?
CONSER004 CONSER004Unspecified?
fvvmg059_c fvvmg059_cUnspecified?
fvv385 fvv385Unspecified?
CONSER005 CONSER005Unspecified?
fvv078 fvv078Unspecified?
fvv279_ctg fvv279_ctgUnspecified?
fvv558 fvv558Unspecified?
fvv588_1 fvv588_1Unspecified?
fvv557 fvv557Unspecified?
fvv039 fvv039Unspecified?
fvvr97_ctg fvvr97_ctgUnspecified?
fvv589 fvv589Unspecified?
fvvmg95198 fvvmg95198Unspecified?
fvvmg95168 fvvmg95168Unspecified?
fvv597 fvv597Unspecified?
fvvmg95153 fvvmg95153Unspecified?
L588_2_ctg L588_2_ctgUnspecified?
fvvmg032 fvvmg032Unspecified?
fvv074 fvv074Unspecified?
fvvmg95154 fvvmg95154Unspecified?
fvv049 fvv049Unspecified?
CBT3110000 CBT3110000Unspecified?
fvv576_ctg fvv576_ctgUnspecified?
fvv190 fvv190Unspecified?
fvv192 fvv192Unspecified?
fvv332_ctg fvv332_ctgUnspecified?
fvv553_ctg fvv553_ctgUnspecified?
4162 4162Unspecified?
fvv343 fvv343Unspecified?
A_aest__MA A_aest__MAUnspecified?
fvv161 fvv161Unspecified?