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DNA Surveillance

Species identification with DNA
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General details for dataset 'Bps1 end COI Brazil'

Loci: Cytochrome Oxidase sub.1 (end)
Domain: Brazilian Psittacidae v1.0 (non curated)
Alignment: 55 sequences, 513 sites
Alignment scoring
-ACGT
A1.0-1.0-1.0-1.0
C-1.01.0-1.0-1.0
G-1.0-1.01.0-1.0
T-1.0-1.0-1.01.0
Create/extend = -2.9/-0.7
Substitution model
-ACGT
A-1.01.01.0
C1.0-1.01.0
G1.01.0-1
T1.01.01-
(A,G,C,T) = (0.25, 0.25, 0.25, 0.25)

Sequence details

IDNameGroupGenBank
CM33305025 Amazona aestivaAmazona 33305025
CM33305027 Amazona aestivaAmazona 33305027
CM91694405 Amazona aestiva aestivaAmazona 91694405
CM91694383 Amazona aestiva aestivaAmazona 91694383
CM91694387 Amazona aestiva aestivaAmazona 91694387
CM91694389 Amazona aestiva aestivaAmazona 91694389
CM91694403 Amazona aestiva aestivaAmazona 91694403
CM91694407 Amazona aestiva aestivaAmazona 91694407
CM91694411 Amazona aestiva aestivaAmazona 91694411
CM91694425 Amazona aestiva aestivaAmazona 91694425
CM91694423 Amazona aestiva aestivaAmazona 91694423
CM91694401 Amazona aestiva aestivaAmazona 91694401
CM91694397 Amazona aestiva xanthopteryxAmazona 91694397
CM91694415 Amazona aestiva xanthopteryxAmazona 91694415
CM91694427 Amazona ochrocephala nattereriAmazona 91694427
CM91694385 Amazona ochrocephala nattereriAmazona 91694385
CM91694395 Amazona ochrocephala nattereriAmazona 91694395
CM91694399 Amazona ochrocephala nattereriAmazona 91694399
CM91694379 Amazona ochrocephala nattereriAmazona 91694379
CM91694377 Amazona ochrocephala nattereriAmazona 91694377
CM91694393 Amazona ochrocephala nattereriAmazona 91694393
CM91694429 Amazona ochrocephala ochrocephalaAmazona 91694429
CM91694417 Amazona ochrocephala ochrocephalaAmazona 91694417
CM91694409 Amazona ochrocephala ochrocephalaAmazona 91694409
CM91694381 Amazona ochrocephala ochrocephalaAmazona 91694381
CM91694375 Amazona ochrocephala xantholaemaAmazona 91694375
CM91694413 Amazona ochrocephala xantholaemaAmazona 91694413
CM91694421 Amazona ochrocephala xantholaemaAmazona 91694421
CM91694419 Amazona ochrocephala xantholaemaAmazona 91694419
CM91694391 Amazona ochrocephala xantholaemaAmazona 91694391
CM33305015 Anodorhynchus hyacinthinusAnodorhynchus 33305015
CM33305017 Anodorhynchus hyacinthinusAnodorhynchus 33305017
CM33305013 Anodorhynchus leariAnodorhynchus 33305013
CM33305019 Ara araraunaAra 33305019
CM33305021 Ara araraunaAra 33305021
CM33305035 Ara severaAra 33305035
CM33305037 Ara severaAra 33305037
CM33305033 Aratinga aureaAratinga 33305033
CM33305041 Aratinga cactorumAratinga 33305041
CM33305039 Aratinga leucophthalmusAratinga 33305039
CM33305051 Brotogeris versicolurusBrotogeris 33305051
CM33305031 Cyanopsitta spixiiCyanopsitta 33305031
CM33305029 Cyanopsitta spixiiCyanopsitta 33305029
CM33305045 Diopsittaca nobilisDiopsittaca 33305045
CM33305043 Diopsittaca nobilisDiopsittaca 33305043
CM33305023 Guaruba guaroubaGuaruba 33305023
CM33305053 Myiopsitta monachusMyiopsitta 33305053
CM33305055 Myiopsitta monachusMyiopsitta 33305055
CM33305057 Nandayus nendayNandayus 33305057
CM33305059 Nandayus nendayNandayus 33305059
CM33305047 Primolius auricollisPrimolius 33305047
CM33305065 Primolius couloniPrimolius 33305065
CM33305049 Primolius maracanaPrimolius 33305049
CM33305061 Pyrrhura pictaPyrrhura 33305061
CM33305063 Pyrrhura pictaPyrrhura 33305063